Norddeutsches Zentrum für Mikrobielle Genomforschung

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NZMG - Norddeutsches Zentrum für Mikrobielle Genomforschung
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   Last update: 07 Mar 2017
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Scientific publications of NZMG projects
 

Billerbeck S, Wemheuer B, Voget S, Poehlein A, Giebel H-A, Brinkhoff T, Gram L, Jeffrey WH, Daniel R, Simon M (2016) Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage. Nature Microbiol 1:16063 (abstract).

Genth H, Schelle I, Just I (2016) Metal ion activation of Clostridium sordellii lethal toxin and Clostridium difficile toxin B. Toxins (Basel) 16 8:109.

Janssen I, Cooper P, Gunka K, Rupnik M, Wetzel D, Zimmermann O, Groß U (2016) High prevalence of nontoxigenic Clostridium difficile in rural Ghana: a cross-sectional, single-centre study. Int J Med Microbiol doi: 10.1016/j.ijmm.2016.09.004.

Junemann J, Birgin G, Erdmann J, Schröder A, Just I, Gerhard R, Pich A (2016) Toxin A of the nosocomial pathogen Clostridium difficile induces early effects in the proteome of HEp-2 cells. Proteomics Clinical Applications submitted.

Kanukollu S, Wemheuer B, Herber J, Billerbeck S, Lucas J, Daniel R, Simon M, Cypionka H, Engelen B (2016) Distinct compositions of free-living, particle-associated and benthic communities of the Roseobacter group in the North Sea. FEMS Microbiol Ecol 92:fiv137 (abstract).

Osterholz H, Singer G, Wemheuer B, Daniel R, Simon M, Niggemann J, Dittmar T (2016) Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system. ISME J 1-14 (abstract).

Tao L, Zhang J, Meraner P, Tovaglieri A, Wu X, Gerhard R, Zhang X, Stallcup WB, Miao J, He, Hurdle JG, Breault DT, Brass AL, Dong M (2016) Frizzled are colonic epithelial receptors for Clostridium difficile toxin B. Nature (doi: 10.1038/nature19799).

Ünal CM, Steinert M (2016) Novel therapeutic strategies for Clostridium difficile infections. Expert Opin Ther Targets 20:269-285.

Goy S, Olling A, Neumann D, Pich A, Gerhard R (2015) Human neutrophils are activated by a peptide fragment of Clostridium difficile Toxin B presumably via formyl peptide receptor. Cell Microbiol 17:893-909.

Neumann AM, Balmonte JP, Berger M, Giebel HA, Arnosti C, Voget S, Simon M, Brinkhoff T, Wietz M (2015) Different utilization of alginate and other algal polysaccharides by marine Alteromonas macleodii ecotypes. Environ Microbiol 17:3857-3868 (abstract).

Neumann-Schaal M, Hofmann JD, Will SE, Schomburg D (2015) Time-resolved amino acid uptake of Clostridium difficile 630?erm and concomitant fermentation product and toxin formation. BMC Microbiol 15:281.

Riedel T, Bunk B, Thürmer A, Spröer C, Brzuszkiewicz E, Abt B, Gronow S, Liesegang H, Daniel R, Overmann J (2015) Genome resequencing of the virulent and multidrug-resistant reference strain Clostridium difficile 630. Genome Announc 3:e00276-15 (abstract).

Riedel T, Bunk B, Wittmann J, Thürmer A, Spröer C, Gronow S, Liesegang H, Daniel R, Overmann J (2015) Complete genome sequence of the Clostridium difficile type strain DSM 1296T. Genome Announc 3:e01186-15 (abstract).

Seugendo M, Mshana SE, Hokororo A, Okamo B, Mirambo MM, von Müller L, Gunka K, Zimmermann O, Groß U (2015) Clostridium difficile infections among adults and children in Mwanza/Tanzania: is it an underappreciated pathogen among immune-compromised patients in sub-Saharan Africa?. New Microb New Infect 8:99-102.

Voget S, Wemheuer B, Brinkhoff T, Vollmers J, Dietrich S, Giebel H.-A., Beardsley C, Sardemann C, Bakenhus I, Billerbeck S, Daniel R, Simon M (2015) Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses. ISME J 9:371-384 (abstract).

Voget S, Billerbeck S, Simon M, Daniel R (2015) Closed genome sequence of Octadecabacter temperatus SB1, the first mesophilic species of the genus Octadecabacter. Genome Announc 3:e01051-15 (abstract).

Wietz M, Wemheuer B, Simon H, Giebel HA, Seibt MA, Daniel R, Brinkhoff T, Simon M (2015) Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans. Environ Microbiol 17:3822-3831 (abstract).

Wittmann J, Riedel T, Bunk B, Spröer C, Gronow S, Overmann J (2015) Complete genome sequence of the temperate Clostridium difficile Phage phiCDIF1296T. Genome Announc 3:e00839-15.

Zautner AE, Masanta WO, Weig M, Gro&stlig; U, Bader O (2015) Mass spectrometry-based phyloproteomics (MSPP): A novel microbial typing method. Sci Rep 25:13431.

Jochim N, Gerhard R, Just I, Pich A (2014) Time-resolved cellular effects induced by TcdA from Clostridium difficile. Rapid Commun Mass Spectrom 28:1089-1100.

Wemheuer B, Güllert S, Billerbeck S, Giebel H-A, Voget S, Simon M, Daniel R (2014) Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches. FEMS Microbiology Ecology 87:378-389 (abstract).

Wohlan K, Goy S, Olling A, Srivaratharajan S, Tatge H, Genth H, Gerhard R (2014) Pyknotic cell death induced by Clostridium difficile TcdB: chromatin condensation and nuclear blister are induced independently of the glucosyltransferase activity. Cell Microbiol 16:1678-1692.

Dogs M, Voget S, Teshima H, Petersen J, Davenport K, Dalnigault H, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Standfest S, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M (2013) Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing member of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens. Stand Genomic Sci 9:142-159 (abstract).

Giebel H-G, Kalhoefer D, Gahl-Janssen R, Choo Y-J, Lee K, Cho J-C, Tindall BJ, Rhiel E, Beardsley C, Aydogmus ÖO, Voget S, Daniel R, Simon M, Brinkhoff T (2013) Planktomarina temperata gen. nov., sp. nov., belonging to the globally distributed RCA cluster of the marine Roseobacter clade, isolated from the German Wadden Sea. Int J Syst Evol Microbiol 63:4207-4217 (abstract).

May M, Wang T, Müller M, Genth H (2013) Difference in F-actin depolymerization induced by toxin B from the Clostridium difficile strain VPI 10463 and toxin B from the variant Clostridium difficile serotype F strain 1470. Toxins 5:106-119.

Vollmers J, Voget S, Dietrich S, Gollnow K, Smits M, Meyer K, Brinkhoff T, Simon M, Daniel R (2013) Poles apart: arctic and antarctic Octadecabacter strains share high genome plasticity and a new type of xanthorhodopsin. PLoS One 8:e63422 (abstract).